Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 FAM220BP-201ENST00000377689 816 ntBASIC11.78□□□□□ -0.52
IFNA1P01562 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
IFNA1P01562 PCED1CP-201ENST00000419887 785 ntBASIC11.78□□□□□ -0.52
IFNA1P01562 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 RPS2P1-201ENST00000434010 821 ntBASIC11.78□□□□□ -0.52
IFNA1P01562 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.78□□□□□ -0.52
IFNA1P01562 AC073648.2-201ENST00000510116 352 ntBASIC11.78□□□□□ -0.52
IFNA1P01562 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
IFNA1P01562 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.78□□□□□ -0.52
IFNA1P01562 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.78□□□□□ -0.52
IFNA1P01562 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.78□□□□□ -0.52
IFNA1P01562 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.78□□□□□ -0.52
IFNA1P01562 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.78□□□□□ -0.52
IFNA1P01562 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.78□□□□□ -0.52
IFNA1P01562 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 AC012617.1-204ENST00000586340 2305 ntBASIC11.78□□□□□ -0.52
IFNA1P01562 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
IFNA1P01562 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
IFNA1P01562 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.78□□□□□ -0.52
IFNA1P01562 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 IER3-202ENST00000376377 1350 ntBASIC11.78□□□□□ -0.52
IFNA1P01562 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.78□□□□□ -0.52
IFNA1P01562 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.78□□□□□ -0.52
IFNA1P01562 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.78□□□□□ -0.52
IFNA1P01562 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
IFNA1P01562 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
IFNA1P01562 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
IFNA1P01562 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
IFNA1P01562 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
IFNA1P01562 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.77□□□□□ -0.52
IFNA1P01562 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
IFNA1P01562 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.77□□□□□ -0.52
IFNA1P01562 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
IFNA1P01562 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.77□□□□□ -0.52
IFNA1P01562 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
IFNA1P01562 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
IFNA1P01562 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
IFNA1P01562 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
IFNA1P01562 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC11.77□□□□□ -0.52
IFNA1P01562 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
IFNA1P01562 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
IFNA1P01562 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
IFNA1P01562 AC011840.2-201ENST00000563063 1520 ntBASIC11.77□□□□□ -0.52
IFNA1P01562 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
IFNA1P01562 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IFNA1P01562 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
IFNA1P01562 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IFNA1P01562 WARS-203ENST00000358655 2466 ntTSL 2 BASIC11.77□□□□□ -0.53
IFNA1P01562 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC11.77□□□□□ -0.53
IFNA1P01562 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
IFNA1P01562 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
IFNA1P01562 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
IFNA1P01562 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
IFNA1P01562 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.77□□□□□ -0.53
IFNA1P01562 AL133267.1-201ENST00000398220 340 ntBASIC11.77□□□□□ -0.53
IFNA1P01562 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
IFNA1P01562 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
IFNA1P01562 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.77□□□□□ -0.53
IFNA1P01562 AC211429.1-201ENST00000415277 523 ntBASIC11.77□□□□□ -0.53
IFNA1P01562 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.77□□□□□ -0.53
IFNA1P01562 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IFNA1P01562 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.77□□□□□ -0.53
IFNA1P01562 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.77□□□□□ -0.53
IFNA1P01562 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC11.77□□□□□ -0.53
IFNA1P01562 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.77□□□□□ -0.53
IFNA1P01562 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
IFNA1P01562 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.77□□□□□ -0.53
IFNA1P01562 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.77□□□□□ -0.53
IFNA1P01562 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IFNA1P01562 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.77□□□□□ -0.53
IFNA1P01562 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
IFNA1P01562 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
IFNA1P01562 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC11.77□□□□□ -0.53
IFNA1P01562 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
IFNA1P01562 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
IFNA1P01562 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.77□□□□□ -0.53
IFNA1P01562 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC11.77□□□□□ -0.53
IFNA1P01562 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IFNA1P01562 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
IFNA1P01562 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
IFNA1P01562 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.77□□□□□ -0.53
IFNA1P01562 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IFNA1P01562 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
IFNA1P01562 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
IFNA1P01562 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
IFNA1P01562 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC11.77□□□□□ -0.53
IFNA1P01562 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms