Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.26□□□□□ -0.29
CNOT4O95628 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.26□□□□□ -0.29
CNOT4O95628 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.26□□□□□ -0.29
CNOT4O95628 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.26□□□□□ -0.29
CNOT4O95628 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CNOT4O95628 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.26□□□□□ -0.29
CNOT4O95628 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 MIR1247-201ENST00000408206 136 ntBASIC13.26□□□□□ -0.29
CNOT4O95628 GPAA1P2-201ENST00000417923 928 ntBASIC13.26□□□□□ -0.29
CNOT4O95628 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.26□□□□□ -0.29
CNOT4O95628 AL590640.2-201ENST00000457038 527 ntBASIC13.26□□□□□ -0.29
CNOT4O95628 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CNOT4O95628 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.26□□□□□ -0.29
CNOT4O95628 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.26□□□□□ -0.29
CNOT4O95628 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.26□□□□□ -0.29
CNOT4O95628 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.26□□□□□ -0.29
CNOT4O95628 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CNOT4O95628 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.26□□□□□ -0.29
CNOT4O95628 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.26□□□□□ -0.29
CNOT4O95628 C2orf69P2-201ENST00000562032 1123 ntBASIC13.26□□□□□ -0.29
CNOT4O95628 RN7SL713P-201ENST00000582127 302 ntBASIC13.26□□□□□ -0.29
CNOT4O95628 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 AL139099.5-201ENST00000635274 300 ntBASIC13.26□□□□□ -0.29
CNOT4O95628 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.26□□□□□ -0.29
CNOT4O95628 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.26□□□□□ -0.29
CNOT4O95628 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
CNOT4O95628 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CNOT4O95628 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.26□□□□□ -0.29
CNOT4O95628 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
CNOT4O95628 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNOT4O95628 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.26□□□□□ -0.29
CNOT4O95628 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.26□□□□□ -0.29
CNOT4O95628 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.26□□□□□ -0.29
CNOT4O95628 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.25□□□□□ -0.29
CNOT4O95628 ZBED1P1-201ENST00000502364 1930 ntBASIC13.25□□□□□ -0.29
CNOT4O95628 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CNOT4O95628 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CNOT4O95628 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CNOT4O95628 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CNOT4O95628 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
CNOT4O95628 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.25□□□□□ -0.29
CNOT4O95628 CLUHP2-201ENST00000426660 1303 ntBASIC13.25□□□□□ -0.29
CNOT4O95628 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 MIR1202-201ENST00000408529 83 ntBASIC13.25□□□□□ -0.29
CNOT4O95628 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.25□□□□□ -0.29
CNOT4O95628 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.25□□□□□ -0.29
CNOT4O95628 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.25□□□□□ -0.29
CNOT4O95628 AC106820.3-201ENST00000561653 397 ntBASIC13.25□□□□□ -0.29
CNOT4O95628 RN7SL560P-201ENST00000577943 264 ntBASIC13.25□□□□□ -0.29
CNOT4O95628 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.25□□□□□ -0.29
CNOT4O95628 AC091271.1-201ENST00000611877 1162 ntBASIC13.25□□□□□ -0.29
CNOT4O95628 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.25□□□□□ -0.29
CNOT4O95628 AC009542.2-202ENST00000619004 1067 ntBASIC13.25□□□□□ -0.29
CNOT4O95628 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.25□□□□□ -0.29
CNOT4O95628 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CNOT4O95628 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.25□□□□□ -0.29
CNOT4O95628 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CNOT4O95628 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CNOT4O95628 AC138035.3-201ENST00000622706 2791 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms