Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.67■□□□□ 0.1
RTN3O95197 AL354877.1-201ENST00000424412 413 ntBASIC15.67■□□□□ 0.1
RTN3O95197 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.67■□□□□ 0.1
RTN3O95197 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.67■□□□□ 0.1
RTN3O95197 ALG3P1-201ENST00000508806 1114 ntBASIC15.67■□□□□ 0.1
RTN3O95197 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.67■□□□□ 0.1
RTN3O95197 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.67■□□□□ 0.1
RTN3O95197 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.67■□□□□ 0.1
RTN3O95197 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.67■□□□□ 0.1
RTN3O95197 AC008825.2-201ENST00000603374 718 ntBASIC15.67■□□□□ 0.1
RTN3O95197 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.67■□□□□ 0.1
RTN3O95197 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RTN3O95197 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.67■□□□□ 0.1
RTN3O95197 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.67■□□□□ 0.1
RTN3O95197 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.67■□□□□ 0.1
RTN3O95197 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
RTN3O95197 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.67■□□□□ 0.1
RTN3O95197 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.67■□□□□ 0.1
RTN3O95197 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTN3O95197 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RTN3O95197 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.66■□□□□ 0.1
RTN3O95197 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.66■□□□□ 0.1
RTN3O95197 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.66■□□□□ 0.1
RTN3O95197 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.66■□□□□ 0.1
RTN3O95197 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
RTN3O95197 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.66■□□□□ 0.1
RTN3O95197 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.66■□□□□ 0.1
RTN3O95197 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.66■□□□□ 0.1
RTN3O95197 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.66■□□□□ 0.1
RTN3O95197 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.66■□□□□ 0.1
RTN3O95197 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.66■□□□□ 0.1
RTN3O95197 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
RTN3O95197 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.66■□□□□ 0.1
RTN3O95197 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.66■□□□□ 0.1
RTN3O95197 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.66■□□□□ 0.1
RTN3O95197 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RTN3O95197 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RTN3O95197 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 AC009093.2-202ENST00000620513 2079 ntBASIC15.66■□□□□ 0.1
RTN3O95197 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.66■□□□□ 0.1
RTN3O95197 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.66■□□□□ 0.1
RTN3O95197 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RTN3O95197 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN3O95197 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RTN3O95197 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.65■□□□□ 0.1
RTN3O95197 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RTN3O95197 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN3O95197 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RTN3O95197 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.65■□□□□ 0.1
RTN3O95197 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RTN3O95197 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN3O95197 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RTN3O95197 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN3O95197 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN3O95197 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RTN3O95197 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RTN3O95197 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.65■□□□□ 0.1
RTN3O95197 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.65■□□□□ 0.1
RTN3O95197 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.65■□□□□ 0.1
RTN3O95197 AC004898.1-201ENST00000451057 766 ntBASIC15.65■□□□□ 0.1
RTN3O95197 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.65■□□□□ 0.1
RTN3O95197 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RTN3O95197 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.65■□□□□ 0.1
RTN3O95197 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.65■□□□□ 0.1
RTN3O95197 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.65■□□□□ 0.1
RTN3O95197 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.65■□□□□ 0.1
RTN3O95197 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.65■□□□□ 0.1
RTN3O95197 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTN3O95197 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RTN3O95197 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.65■□□□□ 0.1
RTN3O95197 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RTN3O95197 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms