Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.24□□□□□ -0.29
ALX3O95076 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.24□□□□□ -0.29
ALX3O95076 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ALX3O95076 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ALX3O95076 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ALX3O95076 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
ALX3O95076 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.23□□□□□ -0.29
ALX3O95076 BX324167.2-201ENST00000623717 3316 ntBASIC13.23□□□□□ -0.29
ALX3O95076 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ALX3O95076 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.23□□□□□ -0.29
ALX3O95076 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.23□□□□□ -0.29
ALX3O95076 AC138969.2-201ENST00000532739 9932 ntBASIC13.23□□□□□ -0.29
ALX3O95076 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
ALX3O95076 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.23□□□□□ -0.29
ALX3O95076 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.23□□□□□ -0.29
ALX3O95076 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.23□□□□□ -0.29
ALX3O95076 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ALX3O95076 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.23□□□□□ -0.29
ALX3O95076 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.23□□□□□ -0.29
ALX3O95076 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.23□□□□□ -0.29
ALX3O95076 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.23□□□□□ -0.29
ALX3O95076 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.23□□□□□ -0.29
ALX3O95076 TEX28P1-201ENST00000613479 1221 ntBASIC13.23□□□□□ -0.29
ALX3O95076 TEX28P2-201ENST00000617764 1221 ntBASIC13.23□□□□□ -0.29
ALX3O95076 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.23□□□□□ -0.29
ALX3O95076 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ALX3O95076 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
ALX3O95076 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.23□□□□□ -0.29
ALX3O95076 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.23□□□□□ -0.29
ALX3O95076 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.23□□□□□ -0.29
ALX3O95076 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.23□□□□□ -0.29
ALX3O95076 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.23□□□□□ -0.29
ALX3O95076 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ALX3O95076 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
ALX3O95076 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
ALX3O95076 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ALX3O95076 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.23□□□□□ -0.29
ALX3O95076 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
ALX3O95076 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.22□□□□□ -0.29
ALX3O95076 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
ALX3O95076 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.22□□□□□ -0.29
ALX3O95076 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
ALX3O95076 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.22□□□□□ -0.29
ALX3O95076 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.22□□□□□ -0.29
ALX3O95076 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ALX3O95076 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.22□□□□□ -0.29
ALX3O95076 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
ALX3O95076 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.22□□□□□ -0.29
ALX3O95076 AC113367.3-201ENST00000508316 1912 ntBASIC13.22□□□□□ -0.29
ALX3O95076 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.22□□□□□ -0.29
ALX3O95076 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.22□□□□□ -0.29
ALX3O95076 RN7SL618P-201ENST00000477850 296 ntBASIC13.22□□□□□ -0.29
ALX3O95076 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.22□□□□□ -0.29
ALX3O95076 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.22□□□□□ -0.29
ALX3O95076 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.22□□□□□ -0.29
ALX3O95076 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ALX3O95076 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms