Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
GPC4O75487 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GPC4O75487 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
GPC4O75487 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC4O75487 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GPC4O75487 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC4O75487 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GPC4O75487 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.95□□□□□ -0.02
GPC4O75487 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.95□□□□□ -0.02
GPC4O75487 RNU1-114P-201ENST00000365297 166 ntBASIC14.95□□□□□ -0.02
GPC4O75487 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC4O75487 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GPC4O75487 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
GPC4O75487 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.95□□□□□ -0.02
GPC4O75487 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.95□□□□□ -0.02
GPC4O75487 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 KLF2P2-201ENST00000416807 1039 ntBASIC14.95□□□□□ -0.02
GPC4O75487 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.95□□□□□ -0.02
GPC4O75487 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
GPC4O75487 COX20P2-201ENST00000452636 358 ntBASIC14.95□□□□□ -0.02
GPC4O75487 AC093433.1-201ENST00000458048 571 ntBASIC14.95□□□□□ -0.02
GPC4O75487 RN7SL752P-201ENST00000463779 287 ntBASIC14.95□□□□□ -0.02
GPC4O75487 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
GPC4O75487 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.95□□□□□ -0.02
GPC4O75487 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC4O75487 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.95□□□□□ -0.02
GPC4O75487 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GPC4O75487 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.95□□□□□ -0.02
GPC4O75487 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GPC4O75487 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GPC4O75487 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC4O75487 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.95□□□□□ -0.02
GPC4O75487 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
GPC4O75487 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC4O75487 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GPC4O75487 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
GPC4O75487 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GPC4O75487 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC4O75487 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC4O75487 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC4O75487 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC4O75487 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC4O75487 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GPC4O75487 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
GPC4O75487 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
GPC4O75487 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.94□□□□□ -0.02
GPC4O75487 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.94□□□□□ -0.02
GPC4O75487 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.94□□□□□ -0.02
GPC4O75487 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GPC4O75487 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
GPC4O75487 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.94□□□□□ -0.02
GPC4O75487 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.94□□□□□ -0.02
GPC4O75487 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
GPC4O75487 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.94□□□□□ -0.02
GPC4O75487 RN7SL837P-201ENST00000463010 287 ntBASIC14.94□□□□□ -0.02
GPC4O75487 AC011495.1-201ENST00000498085 584 ntBASIC14.94□□□□□ -0.02
GPC4O75487 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.94□□□□□ -0.02
GPC4O75487 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
GPC4O75487 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.94□□□□□ -0.02
GPC4O75487 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
GPC4O75487 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
GPC4O75487 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
GPC4O75487 DUX4L47-201ENST00000566374 394 ntBASIC14.94□□□□□ -0.02
GPC4O75487 AC009486.1-201ENST00000569860 813 ntBASIC14.94□□□□□ -0.02
GPC4O75487 AC010319.3-201ENST00000597028 470 ntBASIC14.94□□□□□ -0.02
GPC4O75487 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
GPC4O75487 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.94□□□□□ -0.02
GPC4O75487 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms