Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ZIC3O60481 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ZIC3O60481 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 AC009093.10-201ENST00000641956 1442 ntBASIC13.29□□□□□ -0.28
ZIC3O60481 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.29□□□□□ -0.28
ZIC3O60481 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ZIC3O60481 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZIC3O60481 TMBIM7P-202ENST00000641474 1516 ntBASIC13.29□□□□□ -0.28
ZIC3O60481 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.28□□□□□ -0.28
ZIC3O60481 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.28□□□□□ -0.28
ZIC3O60481 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ZIC3O60481 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
ZIC3O60481 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ZIC3O60481 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.28□□□□□ -0.28
ZIC3O60481 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.28□□□□□ -0.28
ZIC3O60481 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.28□□□□□ -0.28
ZIC3O60481 AC044849.1-201ENST00000519737 1188 ntBASIC13.28□□□□□ -0.28
ZIC3O60481 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.28□□□□□ -0.28
ZIC3O60481 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
ZIC3O60481 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.28□□□□□ -0.28
ZIC3O60481 AL160314.3-201ENST00000556041 767 ntBASIC13.28□□□□□ -0.28
ZIC3O60481 MIR3615-201ENST00000581999 87 ntBASIC13.28□□□□□ -0.28
ZIC3O60481 RN7SL163P-201ENST00000583100 276 ntBASIC13.28□□□□□ -0.28
ZIC3O60481 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 AL451050.2-201ENST00000606967 682 ntBASIC13.28□□□□□ -0.28
ZIC3O60481 MIR6787-201ENST00000616675 61 ntBASIC13.28□□□□□ -0.28
ZIC3O60481 AC068587.8-201ENST00000641239 219 ntBASIC13.28□□□□□ -0.28
ZIC3O60481 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.28□□□□□ -0.28
ZIC3O60481 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ZIC3O60481 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.28□□□□□ -0.28
ZIC3O60481 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.28□□□□□ -0.28
ZIC3O60481 MYADML-201ENST00000474610 2147 ntBASIC13.28□□□□□ -0.28
ZIC3O60481 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ZIC3O60481 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ZIC3O60481 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.28□□□□□ -0.28
ZIC3O60481 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.28□□□□□ -0.28
ZIC3O60481 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.28□□□□□ -0.28
ZIC3O60481 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
ZIC3O60481 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZIC3O60481 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.27□□□□□ -0.28
ZIC3O60481 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC3O60481 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC3O60481 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
ZIC3O60481 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.27□□□□□ -0.28
ZIC3O60481 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC3O60481 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC3O60481 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC3O60481 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC3O60481 MBLAC2-202ENST00000514906 1936 ntBASIC13.27□□□□□ -0.28
ZIC3O60481 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC3O60481 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC3O60481 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC3O60481 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC3O60481 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZIC3O60481 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
ZIC3O60481 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC3O60481 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC3O60481 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.27□□□□□ -0.29
ZIC3O60481 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ZIC3O60481 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ZIC3O60481 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.27□□□□□ -0.29
ZIC3O60481 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZIC3O60481 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms