Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPB4C9JG80 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 KRT8P24-201ENST00000560290 1559 ntBASIC13.07□□□□□ -0.32
NPIPB4C9JG80 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 AC112492.5-201ENST00000421897 457 ntBASIC13.07□□□□□ -0.32
NPIPB4C9JG80 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 RPL7P3-201ENST00000441388 714 ntBASIC13.07□□□□□ -0.32
NPIPB4C9JG80 KRT17P7-201ENST00000451704 1104 ntBASIC13.07□□□□□ -0.32
NPIPB4C9JG80 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 MIR4683-201ENST00000579659 81 ntBASIC13.07□□□□□ -0.32
NPIPB4C9JG80 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 TUBB8P4-201ENST00000511806 1324 ntBASIC13.07□□□□□ -0.32
NPIPB4C9JG80 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPB4C9JG80 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 AC139749.1-202ENST00000617529 3139 ntBASIC13.06□□□□□ -0.32
NPIPB4C9JG80 AC011474.4-201ENST00000623523 2076 ntBASIC13.06□□□□□ -0.32
NPIPB4C9JG80 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 SHC1P1-201ENST00000425230 1745 ntBASIC13.06□□□□□ -0.32
NPIPB4C9JG80 AL928921.2-201ENST00000641325 2442 ntBASIC13.06□□□□□ -0.32
NPIPB4C9JG80 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.06□□□□□ -0.32
NPIPB4C9JG80 CNN2P10-201ENST00000443067 918 ntBASIC13.06□□□□□ -0.32
NPIPB4C9JG80 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms