Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 SAT1-201ENST00000379251 801 ntTSL 2 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 SAT1-202ENST00000379253 909 ntTSL 2 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 SAT1-203ENST00000379254 868 ntTSL 3 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC098934.1-203ENST00000442868 1262 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 AL135901.1-201ENST00000451812 333 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC093826.1-201ENST00000508655 993 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 RNA5SP406-201ENST00000516106 112 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC140658.4-201ENST00000561990 352 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC055811.3-201ENST00000584952 686 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 AL133467.4-201ENST00000602953 725 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 FAM90A21P-201ENST00000510875 1396 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 FAM90A15P-201ENST00000514465 1395 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 FAM90A6P-201ENST00000515148 1394 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 FAM90A16P-201ENST00000526662 1395 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 FAM90A9P-201ENST00000527940 1395 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 FAM90A5P-201ENST00000528738 1395 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 FAM90A14P-201ENST00000530386 1395 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 FAM90A13P-201ENST00000534703 1395 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 LINC00528-201ENST00000600723 2160 ntBASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LOC102724428A0A0B4J2F2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 RN7SL23P-201ENST00000484055 275 ntBASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 FAM86B3P-203ENST00000523992 854 ntBASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC012158.2-201ENST00000536546 354 ntBASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC021016.3-201ENST00000608367 477 ntBASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 AL162727.3-201ENST00000635661 2787 ntBASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 AL591122.2-201ENST00000624125 1853 ntBASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 CTBP2P8-201ENST00000422584 1330 ntBASIC18.48■□□□□ 0.55
LOC102724428A0A0B4J2F2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LOC102724428A0A0B4J2F2 SCARNA12-201ENST00000459155 270 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms