Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14□□□□□ -0.17
CCDC187A0A096LP49 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 AL583805.1-201ENST00000391389 531 ntBASIC14□□□□□ -0.17
CCDC187A0A096LP49 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 XBP1P1-201ENST00000436573 652 ntBASIC14□□□□□ -0.17
CCDC187A0A096LP49 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 AC130709.1-201ENST00000484779 1212 ntBASIC14□□□□□ -0.17
CCDC187A0A096LP49 FOS-204ENST00000554617 796 ntTSL 2 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 AC093752.3-201ENST00000567343 901 ntBASIC14□□□□□ -0.17
CCDC187A0A096LP49 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC187A0A096LP49 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
CCDC187A0A096LP49 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 AL512430.1-201ENST00000392575 860 ntBASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 TSPY25P-201ENST00000429463 745 ntBASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 CHCHD2P9-201ENST00000461726 456 ntBASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 AP000845.1-201ENST00000581677 2131 ntBASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 AC015909.3-201ENST00000572855 1794 ntBASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC187A0A096LP49 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 AC018629.1-201ENST00000623381 1736 ntBASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC187A0A096LP49 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms