Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 KRT18P25-201ENST00000508931 1278 ntBASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 RNA5SP423-201ENST00000517127 109 ntBASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 AC145423.3-201ENST00000615987 467 ntBASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 AL008638.5-201ENST00000623814 1298 ntBASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
FNDC3AQ9Y2H6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 AJ011931.1-201ENST00000618749 2492 ntBASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 AHCYP2-201ENST00000430630 1300 ntBASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 AC092506.1-202ENST00000401022 528 ntBASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 AL591846.1-201ENST00000451736 433 ntBASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 AP005019.2-201ENST00000615104 511 ntBASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 AL645728.2-202ENST00000641679 227 ntBASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 ACE3P-201ENST00000423435 1973 ntBASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 ZBED1P1-201ENST00000502364 1930 ntBASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 AL138709.1-201ENST00000614840 1693 ntBASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 AL137783.1-201ENST00000623494 1896 ntBASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC3AQ9Y2H6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.24■□□□□ 0.03
FNDC3AQ9Y2H6 LRRC59-203ENST00000576448 1531 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms