Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 RN7SKP175-201ENST00000408472 289 ntBASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 AC022217.1-201ENST00000521069 738 ntBASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 AC100827.2-201ENST00000563214 1194 ntBASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 AC004466.1-201ENST00000599515 1080 ntBASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 AC023157.3-201ENST00000619086 2088 ntBASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 AL009178.2-201ENST00000597278 2719 ntBASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 SPTLC1P5-201ENST00000450718 252 ntBASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 RN7SL11P-201ENST00000471305 293 ntBASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 AC105129.2-201ENST00000559536 390 ntBASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 AC008825.2-201ENST00000603374 718 ntBASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
SSX2IPQ9Y2D8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 KRT8P19-201ENST00000551916 1455 ntBASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SSX2IPQ9Y2D8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms