Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 HGNC:18790-207ENST00000505246 973 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 AC104072.1-201ENST00000568817 668 ntBASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 AC017076.1-201ENST00000607613 578 ntBASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 AC005912.2-201ENST00000619492 2400 ntBASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 AC134312.5-201ENST00000568031 1313 ntBASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 AC003102.2-201ENST00000589195 1469 ntBASIC14.89□□□□□ -0.03
VPS9D1Q9Y2B5 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 CT45A11P-201ENST00000448043 1134 ntBASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 AC022447.6-201ENST00000515522 438 ntBASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 AC068587.3-201ENST00000526613 355 ntBASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 TDH-203ENST00000531764 1110 ntBASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 AL158050.2-201ENST00000605336 568 ntBASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 AC097520.1-201ENST00000624435 385 ntBASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 AC015802.1-201ENST00000588104 1449 ntBASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS9D1Q9Y2B5 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS9D1Q9Y2B5 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS9D1Q9Y2B5 AL354702.1-201ENST00000442006 1960 ntBASIC14.87□□□□□ -0.03
VPS9D1Q9Y2B5 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS9D1Q9Y2B5 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS9D1Q9Y2B5 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS9D1Q9Y2B5 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS9D1Q9Y2B5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS9D1Q9Y2B5 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS9D1Q9Y2B5 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS9D1Q9Y2B5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS9D1Q9Y2B5 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VPS9D1Q9Y2B5 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
VPS9D1Q9Y2B5 FABP5-201ENST00000297258 851 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS9D1Q9Y2B5 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms