Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AC015688.4-201ENST00000580780 1647 ntBASIC14.05□□□□□ -0.16
VAPAQ9P0L0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AC023794.5-201ENST00000564380 2157 ntBASIC14.05□□□□□ -0.16
VAPAQ9P0L0 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 KLF2P2-201ENST00000416807 1039 ntBASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AC134915.1-201ENST00000426461 574 ntBASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AC055876.3-201ENST00000431496 288 ntBASIC14.05□□□□□ -0.16
VAPAQ9P0L0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 GIMAP3P-201ENST00000495150 836 ntBASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AC131206.1-201ENST00000538078 1211 ntBASIC14.05□□□□□ -0.16
VAPAQ9P0L0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 RRP7BP-205ENST00000566851 833 ntBASIC14.05□□□□□ -0.16
VAPAQ9P0L0 MIR6074-201ENST00000612054 107 ntBASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AC138649.4-201ENST00000612222 287 ntBASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AL691403.2-201ENST00000618460 490 ntBASIC14.05□□□□□ -0.16
VAPAQ9P0L0 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 MRPL37P1-201ENST00000592451 1337 ntBASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VAPAQ9P0L0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 SPDYE19P-201ENST00000338590 713 ntBASIC14.04□□□□□ -0.16
VAPAQ9P0L0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VAPAQ9P0L0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 213.6 ms