Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 HINT1-205ENST00000508488 703 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 FAM86B3P-203ENST00000523992 854 ntBASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC52A1Q9NWF4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 RN7SL494P-201ENST00000461517 304 ntBASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 RN7SL564P-201ENST00000496309 250 ntBASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 IGHV1-12-201ENST00000518307 205 ntBASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 AL118522.1-201ENST00000611368 560 ntBASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 ST5-261ENST00000626808 1071 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A1Q9NWF4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 MIR6746-201ENST00000620971 63 ntBASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 AC067931.2-201ENST00000623655 2003 ntBASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A1Q9NWF4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms