Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 FXNP2-201ENST00000411625 547 ntBASIC15.41■□□□□ 0.06
LRRC3Q9BY71 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 AC234782.1-201ENST00000451950 919 ntBASIC15.41■□□□□ 0.06
LRRC3Q9BY71 CEP164P1-201ENST00000455142 418 ntBASIC15.41■□□□□ 0.06
LRRC3Q9BY71 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 MIR4754-201ENST00000582477 89 ntBASIC15.41■□□□□ 0.06
LRRC3Q9BY71 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 AL157813.1-201ENST00000612996 587 ntBASIC15.41■□□□□ 0.06
LRRC3Q9BY71 AC006453.1-201ENST00000636037 1257 ntBASIC15.41■□□□□ 0.06
LRRC3Q9BY71 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 LINC02228-204ENST00000642115 2962 ntBASIC15.41■□□□□ 0.06
LRRC3Q9BY71 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC3Q9BY71 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.4■□□□□ 0.06
LRRC3Q9BY71 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 TMBIM7P-202ENST00000641474 1516 ntBASIC15.4■□□□□ 0.06
LRRC3Q9BY71 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 MIR33B-201ENST00000385104 96 ntBASIC15.4■□□□□ 0.06
LRRC3Q9BY71 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 RTN3P1-201ENST00000536295 711 ntBASIC15.4■□□□□ 0.06
LRRC3Q9BY71 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.4■□□□□ 0.06
LRRC3Q9BY71 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRC3Q9BY71 AC068587.6-202ENST00000641839 5619 ntBASIC15.4■□□□□ 0.06
LRRC3Q9BY71 KRT8P21-201ENST00000430398 1491 ntBASIC15.4■□□□□ 0.06
LRRC3Q9BY71 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
LRRC3Q9BY71 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC3Q9BY71 FAM45BP-202ENST00000592932 1624 ntBASIC15.39■□□□□ 0.05
LRRC3Q9BY71 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.39■□□□□ 0.05
LRRC3Q9BY71 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LRRC3Q9BY71 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRC3Q9BY71 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms