Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 RN7SKP230-201ENST00000365642 335 ntBASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 ALG3P1-201ENST00000508806 1114 ntBASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 AC005740.2-201ENST00000511085 419 ntBASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 AC245884.6-201ENST00000515672 1067 ntBASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 MIR4783-201ENST00000580343 82 ntBASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 AC100757.4-201ENST00000626934 759 ntBASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 FKBP4P6-201ENST00000457486 1332 ntBASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 RN7SL720P-201ENST00000488178 304 ntBASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 AC009955.4-201ENST00000597192 544 ntBASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 AC026740.1-201ENST00000607068 791 ntBASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 AL358472.3-201ENST00000608147 415 ntBASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 CU633904.3-201ENST00000624042 1029 ntBASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.91■□□□□ 0.46
RPAP1Q9BWH6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 AC011742.3-201ENST00000439053 820 ntBASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 RN7SL574P-201ENST00000581512 297 ntBASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 AC091544.8-201ENST00000619490 361 ntBASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPAP1Q9BWH6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms