Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAIPQ9BWF2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAIPQ9BWF2 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRAIPQ9BWF2 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAIPQ9BWF2 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.27■□□□□ 0.2
TRAIPQ9BWF2 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAIPQ9BWF2 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAIPQ9BWF2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAIPQ9BWF2 DUX4L46-201ENST00000566845 751 ntBASIC16.27■□□□□ 0.2
TRAIPQ9BWF2 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAIPQ9BWF2 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRAIPQ9BWF2 AL136301.1-201ENST00000615830 422 ntBASIC16.27■□□□□ 0.2
TRAIPQ9BWF2 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRAIPQ9BWF2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAIPQ9BWF2 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TRAIPQ9BWF2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAIPQ9BWF2 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAIPQ9BWF2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAIPQ9BWF2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAIPQ9BWF2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAIPQ9BWF2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.27■□□□□ 0.19
TRAIPQ9BWF2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAIPQ9BWF2 AC023908.3-201ENST00000564211 3047 ntBASIC16.27■□□□□ 0.19
TRAIPQ9BWF2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 AC009093.2-202ENST00000620513 2079 ntBASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 AC023024.2-201ENST00000623561 1993 ntBASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 AC145098.2-201ENST00000623593 3026 ntBASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 EIF4HP1-201ENST00000453115 687 ntBASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 IGHJ2P-201ENST00000454480 60 ntBASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 AC022217.1-201ENST00000521069 738 ntBASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 BX088702.1-201ENST00000610784 235 ntBASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 AC100757.4-201ENST00000626934 759 ntBASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 WASH3P-207ENST00000560956 1394 ntBASIC16.26■□□□□ 0.19
TRAIPQ9BWF2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 AC003102.2-201ENST00000589195 1469 ntBASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 AL390755.1-201ENST00000623716 2027 ntBASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 AL662890.1-201ENST00000396818 632 ntBASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 AC021723.1-201ENST00000486306 515 ntBASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 AC005740.2-201ENST00000511085 419 ntBASIC16.25■□□□□ 0.19
TRAIPQ9BWF2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms