Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHMP6Q96FZ7 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CHMP6Q96FZ7 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.02■□□□□ -0
CHMP6Q96FZ7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHMP6Q96FZ7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CHMP6Q96FZ7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CHMP6Q96FZ7 FO393414.2-201ENST00000405153 598 ntBASIC15.02■□□□□ -0
CHMP6Q96FZ7 ADH5P3-201ENST00000433842 1137 ntBASIC15.02■□□□□ -0
CHMP6Q96FZ7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
CHMP6Q96FZ7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.02■□□□□ -0
CHMP6Q96FZ7 KRT8P23-201ENST00000560090 1207 ntBASIC15.02■□□□□ -0
CHMP6Q96FZ7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.02■□□□□ -0
CHMP6Q96FZ7 AC074044.1-201ENST00000609673 707 ntBASIC15.02■□□□□ -0
CHMP6Q96FZ7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CHMP6Q96FZ7 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 AL118506.1-201ENST00000601296 3082 ntBASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHMP6Q96FZ7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 AC131212.3-201ENST00000624087 4219 ntBASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 AL360270.3-201ENST00000609118 1348 ntBASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 AC090643.2-201ENST00000623442 2029 ntBASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 BX842568.4-201ENST00000421222 227 ntBASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 SLC25A39P2-201ENST00000537614 270 ntBASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 AC092865.5-201ENST00000545435 363 ntBASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 MIR4469-201ENST00000583919 79 ntBASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 AL671883.3-201ENST00000603274 991 ntBASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHMP6Q96FZ7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms