Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CKAP2Q8WWK9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 YBX2P1-201ENST00000394192 760 ntBASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 AL645937.2-201ENST00000396808 931 ntBASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 AL591424.1-201ENST00000442569 1213 ntBASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 AC140113.2-201ENST00000604370 208 ntBASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CKAP2Q8WWK9 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 MIR497HG-202ENST00000572453 3838 ntBASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 KHSRPP1-201ENST00000427983 1768 ntBASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 KRT18P3-201ENST00000451602 1288 ntBASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 AC135782.3-201ENST00000562782 2105 ntBASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 AL589739.1-201ENST00000607720 493 ntBASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 FAM197Y3-203ENST00000618346 717 ntBASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CKAP2Q8WWK9 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms