Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB4Q8WW32 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AC144522.1-201ENST00000625111 1658 ntBASIC14.84□□□□□ -0.03
HMGB4Q8WW32 ZBED1P1-201ENST00000502364 1930 ntBASIC14.84□□□□□ -0.03
HMGB4Q8WW32 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AC144831.1-201ENST00000573312 2656 ntBASIC14.84□□□□□ -0.03
HMGB4Q8WW32 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AL157407.1-201ENST00000435784 904 ntBASIC14.84□□□□□ -0.03
HMGB4Q8WW32 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AC098935.1-201ENST00000446057 611 ntBASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AL035414.1-201ENST00000451327 857 ntBASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 RN7SL181P-201ENST00000462921 277 ntBASIC14.84□□□□□ -0.03
HMGB4Q8WW32 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AC104784.1-201ENST00000473096 294 ntBASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 GCOM2-201ENST00000509133 1104 ntBASIC14.84□□□□□ -0.03
HMGB4Q8WW32 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 MIR4750-201ENST00000584564 56 ntBASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AL109837.1-201ENST00000603272 613 ntBASIC14.84□□□□□ -0.03
HMGB4Q8WW32 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AL136379.1-201ENST00000623471 2642 ntBASIC14.84□□□□□ -0.03
HMGB4Q8WW32 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.84□□□□□ -0.03
HMGB4Q8WW32 MIR600HG-201ENST00000449175 5984 ntBASIC14.83□□□□□ -0.03
HMGB4Q8WW32 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGB4Q8WW32 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGB4Q8WW32 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.83□□□□□ -0.03
HMGB4Q8WW32 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HMGB4Q8WW32 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGB4Q8WW32 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
HMGB4Q8WW32 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.83□□□□□ -0.03
HMGB4Q8WW32 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGB4Q8WW32 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGB4Q8WW32 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGB4Q8WW32 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.83□□□□□ -0.03
HMGB4Q8WW32 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
HMGB4Q8WW32 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 OR2K2-202ENST00000374428 1038 ntBASIC14.83□□□□□ -0.04
HMGB4Q8WW32 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 RN7SL67P-201ENST00000492147 296 ntBASIC14.83□□□□□ -0.04
HMGB4Q8WW32 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.83□□□□□ -0.04
HMGB4Q8WW32 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms