Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC092384.3-202ENST00000564646 2873 ntBASIC17.65■□□□□ 0.42
SNED1Q8TER0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNED1Q8TER0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNED1Q8TER0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNED1Q8TER0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.65■□□□□ 0.42
SNED1Q8TER0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SNED1Q8TER0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.42
SNED1Q8TER0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNED1Q8TER0 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNED1Q8TER0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SNED1Q8TER0 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC17.64■□□□□ 0.42
SNED1Q8TER0 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SNED1Q8TER0 DDX39AP1-201ENST00000445147 1181 ntBASIC17.64■□□□□ 0.42
SNED1Q8TER0 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC17.64■□□□□ 0.42
SNED1Q8TER0 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC17.64■□□□□ 0.42
SNED1Q8TER0 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SNED1Q8TER0 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.64■□□□□ 0.42
SNED1Q8TER0 OR2A1-AS1-210ENST00000496968 531 ntBASIC17.64■□□□□ 0.42
SNED1Q8TER0 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SNED1Q8TER0 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC17.64■□□□□ 0.42
SNED1Q8TER0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SNED1Q8TER0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNED1Q8TER0 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.64■□□□□ 0.42
SNED1Q8TER0 AP003392.6-201ENST00000607709 325 ntBASIC17.64■□□□□ 0.42
SNED1Q8TER0 RNF146-211ENST00000609447 607 ntTSL 4 BASIC17.64■□□□□ 0.42
SNED1Q8TER0 AL118522.1-201ENST00000611368 560 ntBASIC17.64■□□□□ 0.42
SNED1Q8TER0 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SNED1Q8TER0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.64■□□□□ 0.41
SNED1Q8TER0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SNED1Q8TER0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNED1Q8TER0 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SNED1Q8TER0 CICP23-201ENST00000605013 2741 ntBASIC17.64■□□□□ 0.41
SNED1Q8TER0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNED1Q8TER0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNED1Q8TER0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.64■□□□□ 0.41
SNED1Q8TER0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNED1Q8TER0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNED1Q8TER0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SNED1Q8TER0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SNED1Q8TER0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNED1Q8TER0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SNED1Q8TER0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNED1Q8TER0 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNED1Q8TER0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNED1Q8TER0 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SNED1Q8TER0 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
SNED1Q8TER0 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNED1Q8TER0 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNED1Q8TER0 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC17.64■□□□□ 0.41
SNED1Q8TER0 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNED1Q8TER0 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC17.64■□□□□ 0.41
SNED1Q8TER0 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.64■□□□□ 0.41
SNED1Q8TER0 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC17.64■□□□□ 0.41
SNED1Q8TER0 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.64■□□□□ 0.41
SNED1Q8TER0 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNED1Q8TER0 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SNED1Q8TER0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNED1Q8TER0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNED1Q8TER0 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNED1Q8TER0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNED1Q8TER0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNED1Q8TER0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNED1Q8TER0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNED1Q8TER0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNED1Q8TER0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNED1Q8TER0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNED1Q8TER0 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 AGGF1P1-201ENST00000509500 2073 ntBASIC17.63■□□□□ 0.41
SNED1Q8TER0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNED1Q8TER0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNED1Q8TER0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNED1Q8TER0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNED1Q8TER0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNED1Q8TER0 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 ACTBP7-201ENST00000418351 1124 ntBASIC17.63■□□□□ 0.41
SNED1Q8TER0 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 RN7SL564P-201ENST00000496309 250 ntBASIC17.63■□□□□ 0.41
SNED1Q8TER0 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SNED1Q8TER0 AL133467.4-201ENST00000602953 725 ntBASIC17.63■□□□□ 0.41
SNED1Q8TER0 AP001527.2-201ENST00000614441 631 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms