Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RFWD2Q8NHY2 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD2Q8NHY2 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD2Q8NHY2 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD2Q8NHY2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD2Q8NHY2 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.76□□□□□ -0.05
RFWD2Q8NHY2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.76□□□□□ -0.05
RFWD2Q8NHY2 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFWD2Q8NHY2 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 KRT8P14-201ENST00000414254 1442 ntBASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 AC254562.1-201ENST00000417586 456 ntBASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 DNAJB3-202ENST00000449667 1266 ntBASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 AC023141.5-201ENST00000458585 616 ntBASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 AL591122.2-201ENST00000624125 1853 ntBASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 AC004241.5-201ENST00000623870 2448 ntBASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD2Q8NHY2 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 HLA-K-203ENST00000430151 1046 ntBASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 AL079307.3-201ENST00000556114 283 ntBASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 AC068760.1-201ENST00000493579 1953 ntBASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD2Q8NHY2 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms