Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ACTG1P14-201ENST00000446382 1122 ntBASIC12.91□□□□□ -0.34
BEST4Q8NFU0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 AC022447.6-201ENST00000515522 438 ntBASIC12.91□□□□□ -0.34
BEST4Q8NFU0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 BEND3P3-201ENST00000611030 2440 ntBASIC12.91□□□□□ -0.34
BEST4Q8NFU0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 KRT8P12-202ENST00000472924 1397 ntBASIC12.91□□□□□ -0.34
BEST4Q8NFU0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
BEST4Q8NFU0 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 KRT8P22-201ENST00000562317 1415 ntBASIC12.9□□□□□ -0.34
BEST4Q8NFU0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 ALG1L8P-201ENST00000533887 760 ntBASIC12.9□□□□□ -0.34
BEST4Q8NFU0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 AC025181.2-201ENST00000606994 802 ntBASIC12.9□□□□□ -0.34
BEST4Q8NFU0 AC018529.1-201ENST00000613063 361 ntBASIC12.9□□□□□ -0.34
BEST4Q8NFU0 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 INE2-201ENST00000630399 1874 ntBASIC12.9□□□□□ -0.34
BEST4Q8NFU0 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 AL445209.1-201ENST00000607269 3491 ntBASIC12.9□□□□□ -0.34
BEST4Q8NFU0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BEST4Q8NFU0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
BEST4Q8NFU0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.9□□□□□ -0.35
BEST4Q8NFU0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
BEST4Q8NFU0 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
BEST4Q8NFU0 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
BEST4Q8NFU0 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
BEST4Q8NFU0 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
BEST4Q8NFU0 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 AC111170.3-201ENST00000624282 2464 ntBASIC12.89□□□□□ -0.35
BEST4Q8NFU0 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
BEST4Q8NFU0 YBX2P1-201ENST00000394192 760 ntBASIC12.89□□□□□ -0.35
BEST4Q8NFU0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms