Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC38A9Q8NBW4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 CYP4F23P-201ENST00000593402 1579 ntBASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 AL035414.1-201ENST00000451327 857 ntBASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 RCC2P8-201ENST00000502779 1035 ntBASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 AL161670.2-201ENST00000557650 1227 ntBASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 AC015967.2-201ENST00000624092 234 ntBASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 AC006435.4-201ENST00000625037 234 ntBASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 AL356737.1-201ENST00000634391 234 ntBASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 AC144522.1-201ENST00000625111 1658 ntBASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC38A9Q8NBW4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 AL596276.2-201ENST00000447525 331 ntBASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 AC134698.3-201ENST00000523880 214 ntBASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 MIR600HG-201ENST00000449175 5984 ntBASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC38A9Q8NBW4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms