Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 HNRNPA1P16-201ENST00000575692 955 ntBASIC20.3■□□□□ 0.84
UBR1Q8IWV7 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 AC080013.5-201ENST00000607044 679 ntBASIC20.3■□□□□ 0.84
UBR1Q8IWV7 AC010531.8-201ENST00000623341 685 ntBASIC20.3■□□□□ 0.84
UBR1Q8IWV7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 RNF165-205ENST00000588679 2904 ntBASIC20.3■□□□□ 0.84
UBR1Q8IWV7 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 SIRPB3P-201ENST00000340424 1216 ntBASIC20.3■□□□□ 0.84
UBR1Q8IWV7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 CTBP2P6-201ENST00000526402 1229 ntBASIC20.3■□□□□ 0.84
UBR1Q8IWV7 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 AC120498.7-201ENST00000562876 330 ntBASIC20.3■□□□□ 0.84
UBR1Q8IWV7 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 AC139713.2-207ENST00000641556 1292 ntBASIC20.3■□□□□ 0.84
UBR1Q8IWV7 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBR1Q8IWV7 AL118508.1-201ENST00000613502 2345 ntBASIC20.29■□□□□ 0.84
UBR1Q8IWV7 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 RN7SL351P-201ENST00000469306 248 ntBASIC20.29■□□□□ 0.84
UBR1Q8IWV7 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 AC079414.2-201ENST00000567157 1104 ntBASIC20.29■□□□□ 0.84
UBR1Q8IWV7 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 AC073869.4-201ENST00000620841 800 ntBASIC20.29■□□□□ 0.84
UBR1Q8IWV7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBR1Q8IWV7 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 HLA-DMA-202ENST00000395303 1007 ntBASIC20.28■□□□□ 0.84
UBR1Q8IWV7 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC20.28■□□□□ 0.84
UBR1Q8IWV7 AC110057.1-201ENST00000636031 898 ntBASIC20.28■□□□□ 0.84
UBR1Q8IWV7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC20.28■□□□□ 0.84
UBR1Q8IWV7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBR1Q8IWV7 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBR1Q8IWV7 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBR1Q8IWV7 RHOC-205ENST00000369636 786 ntTSL 2 BASIC20.27■□□□□ 0.84
UBR1Q8IWV7 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC20.27■□□□□ 0.84
UBR1Q8IWV7 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
UBR1Q8IWV7 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms