Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 AC090505.1-201ENST00000430515 1834 ntBASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 AC131206.1-201ENST00000538078 1211 ntBASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 AC190387.1-201ENST00000551683 408 ntBASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 SPCS2P1-201ENST00000561636 679 ntBASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 AC016397.2-201ENST00000624848 1985 ntBASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 AC020910.5-201ENST00000623668 1865 ntBASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 INE2-201ENST00000630399 1874 ntBASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 RN7SL832P-201ENST00000607781 1756 ntBASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 SBF1P1-201ENST00000444527 5631 ntBASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 AC140912.1-201ENST00000577171 1054 ntBASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 AL096865.1-201ENST00000606796 927 ntBASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 MST1P2-201ENST00000457982 2291 ntBASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 AC015688.4-201ENST00000580780 1647 ntBASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 AC011840.2-201ENST00000563063 1520 ntBASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC83Q8IWF9 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
CCDC83Q8IWF9 MRPL37P1-201ENST00000592451 1337 ntBASIC17.46■□□□□ 0.38
CCDC83Q8IWF9 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
CCDC83Q8IWF9 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 AC011474.4-201ENST00000623523 2076 ntBASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC83Q8IWF9 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms