Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 KRT8P35-201ENST00000483942 1338 ntBASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 GIMAP3P-201ENST00000495150 836 ntBASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 KRT18P25-201ENST00000508931 1278 ntBASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 AC140912.1-201ENST00000577171 1054 ntBASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 AL096865.1-201ENST00000606796 927 ntBASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 AC005840.4-201ENST00000541242 2494 ntBASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 AGGF1P1-201ENST00000509500 2073 ntBASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 ACTBP8-201ENST00000403258 1108 ntBASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 AC007969.1-201ENST00000433675 447 ntBASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 AL162726.2-201ENST00000438986 1017 ntBASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 AC190387.1-201ENST00000551683 408 ntBASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 AP001063.1-201ENST00000568332 529 ntBASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 MIR4745-201ENST00000577608 62 ntBASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 GRK6P1-201ENST00000400595 1711 ntBASIC13.19□□□□□ -0.3
LINC00346Q8IVM7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 AC152010.1-201ENST00000415779 2006 ntBASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00346Q8IVM7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms