Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 AP003171.2-201ENST00000528208 925 ntBASIC15.78■□□□□ 0.12
RNF135Q8IUD6 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 AC023157.3-201ENST00000619086 2088 ntBASIC15.78■□□□□ 0.12
RNF135Q8IUD6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 OR2I1P-210ENST00000642037 4691 ntBASIC15.77■□□□□ 0.12
RNF135Q8IUD6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 AC097065.1-201ENST00000425737 517 ntBASIC15.77■□□□□ 0.12
RNF135Q8IUD6 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 TUBB8P8-201ENST00000458717 1058 ntBASIC15.77■□□□□ 0.12
RNF135Q8IUD6 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 AC242376.1-201ENST00000559033 726 ntBASIC15.77■□□□□ 0.12
RNF135Q8IUD6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF135Q8IUD6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
RNF135Q8IUD6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF135Q8IUD6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF135Q8IUD6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF135Q8IUD6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.77■□□□□ 0.11
RNF135Q8IUD6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF135Q8IUD6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF135Q8IUD6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF135Q8IUD6 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF135Q8IUD6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
RNF135Q8IUD6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF135Q8IUD6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RNF135Q8IUD6 AC025271.4-201ENST00000621477 1726 ntBASIC15.77■□□□□ 0.11
RNF135Q8IUD6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.77■□□□□ 0.11
RNF135Q8IUD6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RNF135Q8IUD6 CICP11-201ENST00000434745 2827 ntBASIC15.76■□□□□ 0.11
RNF135Q8IUD6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF135Q8IUD6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms