Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CPNE8Q86YQ8 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 USP32P1-208ENST00000506594 1164 ntBASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 MIR4683-201ENST00000579659 81 ntBASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 AC244669.2-201ENST00000612320 853 ntBASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CPNE8Q86YQ8 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 KHSRPP1-201ENST00000427983 1768 ntBASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE8Q86YQ8 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms