Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM50Q86XT4 FAM90A7P-201ENST00000382628 1395 ntBASIC16.51■□□□□ 0.23
TRIM50Q86XT4 FAM90A23P-201ENST00000400136 1395 ntBASIC16.51■□□□□ 0.23
TRIM50Q86XT4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 PCDHA3-202ENST00000532566 4594 ntBASIC16.51■□□□□ 0.23
TRIM50Q86XT4 ZBED1P1-201ENST00000502364 1930 ntBASIC16.51■□□□□ 0.23
TRIM50Q86XT4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 LINC01101-201ENST00000622953 1884 ntBASIC16.51■□□□□ 0.23
TRIM50Q86XT4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.51■□□□□ 0.23
TRIM50Q86XT4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 AC012441.2-201ENST00000444843 739 ntBASIC16.51■□□□□ 0.23
TRIM50Q86XT4 AC012618.1-201ENST00000461223 412 ntBASIC16.51■□□□□ 0.23
TRIM50Q86XT4 AC120057.1-201ENST00000483947 663 ntBASIC16.51■□□□□ 0.23
TRIM50Q86XT4 RN7SL720P-201ENST00000488178 304 ntBASIC16.51■□□□□ 0.23
TRIM50Q86XT4 RCC2P8-201ENST00000502779 1035 ntBASIC16.51■□□□□ 0.23
TRIM50Q86XT4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 BX088702.1-201ENST00000610784 235 ntBASIC16.51■□□□□ 0.23
TRIM50Q86XT4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 LINC00528-201ENST00000600723 2160 ntBASIC16.51■□□□□ 0.23
TRIM50Q86XT4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM50Q86XT4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 KRT8P19-201ENST00000551916 1455 ntBASIC16.5■□□□□ 0.23
TRIM50Q86XT4 AP002414.2-201ENST00000591780 3365 ntBASIC16.5■□□□□ 0.23
TRIM50Q86XT4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 FAM58BP-201ENST00000439056 645 ntBASIC16.5■□□□□ 0.23
TRIM50Q86XT4 AL133466.1-201ENST00000447582 150 ntBASIC16.5■□□□□ 0.23
TRIM50Q86XT4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 RN7SL769P-201ENST00000469386 295 ntBASIC16.5■□□□□ 0.23
TRIM50Q86XT4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 AC009779.1-201ENST00000551138 283 ntBASIC16.5■□□□□ 0.23
TRIM50Q86XT4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 AC100757.4-201ENST00000626934 759 ntBASIC16.5■□□□□ 0.23
TRIM50Q86XT4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM50Q86XT4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM50Q86XT4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms