Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 AC105233.2-201ENST00000523697 349 ntBASIC12.4□□□□□ -0.42
ZNF546Q86UE3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 AF228730.5-201ENST00000530288 346 ntBASIC12.4□□□□□ -0.42
ZNF546Q86UE3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ZNF546Q86UE3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
ZNF546Q86UE3 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 CSPG4P11-201ENST00000560634 4910 ntBASIC12.39□□□□□ -0.43
ZNF546Q86UE3 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 AC009947.1-201ENST00000444350 727 ntBASIC12.39□□□□□ -0.43
ZNF546Q86UE3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 AC073389.1-201ENST00000595595 795 ntBASIC12.39□□□□□ -0.43
ZNF546Q86UE3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ZNF546Q86UE3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 AC090643.2-201ENST00000623442 2029 ntBASIC12.38□□□□□ -0.43
ZNF546Q86UE3 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.38□□□□□ -0.43
ZNF546Q86UE3 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 207 ms