Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 RNA5SP406-201ENST00000516106 112 ntBASIC11.98□□□□□ -0.49
VPS13CQ709C8 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 RARS-210ENST00000626454 177 ntTSL 5 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13CQ709C8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
VPS13CQ709C8 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 AL512599.1-201ENST00000430724 685 ntBASIC11.97□□□□□ -0.49
VPS13CQ709C8 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 AC098934.1-203ENST00000442868 1262 ntBASIC11.97□□□□□ -0.49
VPS13CQ709C8 RPS18P9-201ENST00000482817 460 ntBASIC11.97□□□□□ -0.49
VPS13CQ709C8 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 WASH7P-201ENST00000488147 1351 ntBASIC11.97□□□□□ -0.49
VPS13CQ709C8 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 PHB-210ENST00000511832 1509 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 OR8T1P-201ENST00000421347 918 ntBASIC11.97□□□□□ -0.49
VPS13CQ709C8 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 RPL3P5-201ENST00000441645 1232 ntBASIC11.97□□□□□ -0.49
VPS13CQ709C8 PFN2-212ENST00000490975 858 ntTSL 4 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 COQ4-204ENST00000608951 781 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13CQ709C8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13CQ709C8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms