Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMARCD3Q6STE5 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMARCD3Q6STE5 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMARCD3Q6STE5 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMARCD3Q6STE5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SMARCD3Q6STE5 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMARCD3Q6STE5 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SMARCD3Q6STE5 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SMARCD3Q6STE5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 AGGF1P1-201ENST00000509500 2073 ntBASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 AL662799.1-202ENST00000614205 422 ntBASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 BX539320.1-201ENST00000623759 877 ntBASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMARCD3Q6STE5 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 AC004890.2-204ENST00000481968 304 ntBASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 TPRX2P-201ENST00000535362 881 ntBASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 AC104794.3-201ENST00000566840 1248 ntBASIC13.61□□□□□ -0.23
SMARCD3Q6STE5 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms