Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 AC092506.1-202ENST00000401022 528 ntBASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 COX5BP1-201ENST00000507622 393 ntBASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 AL451050.2-201ENST00000606967 682 ntBASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC144BQ3MJ40 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 AC084364.1-201ENST00000551967 1556 ntBASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 AC079178.1-201ENST00000420915 656 ntBASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 EIF3FP3-201ENST00000434851 1086 ntBASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 AC126915.1-201ENST00000522847 1038 ntBASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC144BQ3MJ40 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 PPY2P-201ENST00000582808 702 ntBASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 AC244157.2-201ENST00000616239 1006 ntBASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC144BQ3MJ40 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms