Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.54□□□□□ -0.08
CDK3Q00526 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CDK3Q00526 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.54□□□□□ -0.08
CDK3Q00526 VDAC1P1-201ENST00000439229 848 ntBASIC14.54□□□□□ -0.08
CDK3Q00526 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CDK3Q00526 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.54□□□□□ -0.08
CDK3Q00526 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.54□□□□□ -0.08
CDK3Q00526 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.54□□□□□ -0.08
CDK3Q00526 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.54□□□□□ -0.08
CDK3Q00526 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDK3Q00526 AC008805.1-201ENST00000590892 364 ntBASIC14.54□□□□□ -0.08
CDK3Q00526 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.54□□□□□ -0.08
CDK3Q00526 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.54□□□□□ -0.08
CDK3Q00526 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.54□□□□□ -0.08
CDK3Q00526 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CDK3Q00526 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CDK3Q00526 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.54□□□□□ -0.08
CDK3Q00526 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
CDK3Q00526 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.54□□□□□ -0.08
CDK3Q00526 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CDK3Q00526 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.54□□□□□ -0.08
CDK3Q00526 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.53□□□□□ -0.08
CDK3Q00526 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.53□□□□□ -0.08
CDK3Q00526 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.53□□□□□ -0.08
CDK3Q00526 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.53□□□□□ -0.08
CDK3Q00526 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.53□□□□□ -0.08
CDK3Q00526 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.53□□□□□ -0.08
CDK3Q00526 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CDK3Q00526 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 HLA-J-204ENST00000495278 958 ntBASIC14.53□□□□□ -0.08
CDK3Q00526 HIST2H2BC-201ENST00000498492 580 ntBASIC14.53□□□□□ -0.08
CDK3Q00526 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.53□□□□□ -0.08
CDK3Q00526 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.53□□□□□ -0.08
CDK3Q00526 ACTG1P17-201ENST00000558391 1119 ntBASIC14.53□□□□□ -0.08
CDK3Q00526 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.53□□□□□ -0.08
CDK3Q00526 NDUFV2P1-201ENST00000596415 907 ntBASIC14.53□□□□□ -0.08
CDK3Q00526 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CDK3Q00526 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.53□□□□□ -0.08
CDK3Q00526 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDK3Q00526 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.53□□□□□ -0.08
CDK3Q00526 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.53□□□□□ -0.08
CDK3Q00526 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDK3Q00526 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 AC006504.5-208ENST00000588784 2401 ntBASIC14.53□□□□□ -0.08
CDK3Q00526 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 MTHFR-210ENST00000641407 2387 ntBASIC14.53□□□□□ -0.08
CDK3Q00526 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDK3Q00526 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDK3Q00526 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.52□□□□□ -0.08
CDK3Q00526 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDK3Q00526 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.52□□□□□ -0.08
CDK3Q00526 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDK3Q00526 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDK3Q00526 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.52□□□□□ -0.08
CDK3Q00526 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDK3Q00526 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CDK3Q00526 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDK3Q00526 AC015688.4-201ENST00000580780 1647 ntBASIC14.52□□□□□ -0.08
CDK3Q00526 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms