Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
IRX3P78415 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.35■□□□□ 0.37
IRX3P78415 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.35■□□□□ 0.37
IRX3P78415 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.35■□□□□ 0.37
IRX3P78415 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.35■□□□□ 0.37
IRX3P78415 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.35■□□□□ 0.37
IRX3P78415 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
IRX3P78415 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.35■□□□□ 0.37
IRX3P78415 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.35■□□□□ 0.37
IRX3P78415 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.35■□□□□ 0.37
IRX3P78415 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.35■□□□□ 0.37
IRX3P78415 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.35■□□□□ 0.37
IRX3P78415 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
IRX3P78415 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IRX3P78415 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
IRX3P78415 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.34■□□□□ 0.37
IRX3P78415 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
IRX3P78415 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
IRX3P78415 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.34■□□□□ 0.37
IRX3P78415 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IRX3P78415 AC010141.1-201ENST00000411585 623 ntBASIC17.34■□□□□ 0.37
IRX3P78415 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.34■□□□□ 0.37
IRX3P78415 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
IRX3P78415 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.34■□□□□ 0.37
IRX3P78415 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
IRX3P78415 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.34■□□□□ 0.37
IRX3P78415 AC090857.1-201ENST00000527400 390 ntBASIC17.34■□□□□ 0.37
IRX3P78415 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.34■□□□□ 0.37
IRX3P78415 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.34■□□□□ 0.37
IRX3P78415 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.34■□□□□ 0.37
IRX3P78415 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IRX3P78415 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.34■□□□□ 0.37
IRX3P78415 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.34■□□□□ 0.37
IRX3P78415 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
IRX3P78415 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.34■□□□□ 0.37
IRX3P78415 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
IRX3P78415 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.34■□□□□ 0.37
IRX3P78415 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IRX3P78415 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
IRX3P78415 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
IRX3P78415 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
IRX3P78415 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
IRX3P78415 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IRX3P78415 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.33■□□□□ 0.37
IRX3P78415 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IRX3P78415 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
IRX3P78415 REXO1L4P-201ENST00000605109 1937 ntBASIC17.33■□□□□ 0.37
IRX3P78415 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
IRX3P78415 AC020910.5-201ENST00000623668 1865 ntBASIC17.33■□□□□ 0.37
IRX3P78415 GRK6P1-201ENST00000400595 1711 ntBASIC17.33■□□□□ 0.37
IRX3P78415 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IRX3P78415 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
IRX3P78415 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.33■□□□□ 0.37
IRX3P78415 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
IRX3P78415 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
IRX3P78415 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
IRX3P78415 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.33■□□□□ 0.36
IRX3P78415 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX3P78415 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX3P78415 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.33■□□□□ 0.36
IRX3P78415 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IRX3P78415 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX3P78415 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IRX3P78415 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IRX3P78415 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.33■□□□□ 0.36
IRX3P78415 AC234782.1-201ENST00000451950 919 ntBASIC17.33■□□□□ 0.36
IRX3P78415 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
IRX3P78415 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.33■□□□□ 0.36
IRX3P78415 AF254983.2-201ENST00000612331 135 ntBASIC17.33■□□□□ 0.36
IRX3P78415 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
IRX3P78415 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms