Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 BTNL10-201ENST00000595971 695 ntBASIC12.98□□□□□ -0.33
HIST1H3AP68431 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 AL590440.2-201ENST00000641973 1595 ntBASIC12.98□□□□□ -0.33
HIST1H3AP68431 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HIST1H3AP68431 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H3AP68431 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 SNX18-202ENST00000343017 3140 ntBASIC12.97□□□□□ -0.33
HIST1H3AP68431 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.97□□□□□ -0.33
HIST1H3AP68431 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 CNN2P8-201ENST00000421872 913 ntBASIC12.97□□□□□ -0.33
HIST1H3AP68431 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 TTTY23B-201ENST00000442790 549 ntBASIC12.97□□□□□ -0.33
HIST1H3AP68431 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 AP003171.2-201ENST00000528208 925 ntBASIC12.97□□□□□ -0.33
HIST1H3AP68431 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 AC132938.2-201ENST00000579188 680 ntBASIC12.97□□□□□ -0.33
HIST1H3AP68431 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 AL022328.1-201ENST00000610050 478 ntBASIC12.97□□□□□ -0.33
HIST1H3AP68431 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.97□□□□□ -0.33
HIST1H3AP68431 AL591163.1-201ENST00000641757 987 ntBASIC12.97□□□□□ -0.33
HIST1H3AP68431 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 AC139712.1-201ENST00000378256 1875 ntBASIC12.97□□□□□ -0.33
HIST1H3AP68431 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H3AP68431 AC027601.5-201ENST00000624065 2482 ntBASIC12.97□□□□□ -0.33
HIST1H3AP68431 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H3AP68431 KHSRPP1-201ENST00000427983 1768 ntBASIC12.97□□□□□ -0.33
HIST1H3AP68431 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms