Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 EEF1DP1-201ENST00000585891 896 ntBASIC14.13□□□□□ -0.15
SKP1P63208 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.13□□□□□ -0.15
SKP1P63208 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.13□□□□□ -0.15
SKP1P63208 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SKP1P63208 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.13□□□□□ -0.15
SKP1P63208 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
SKP1P63208 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.13□□□□□ -0.15
SKP1P63208 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.13□□□□□ -0.15
SKP1P63208 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SKP1P63208 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SKP1P63208 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.13□□□□□ -0.15
SKP1P63208 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.13□□□□□ -0.15
SKP1P63208 FGD5P1-202ENST00000614866 2498 ntBASIC14.13□□□□□ -0.15
SKP1P63208 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SKP1P63208 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 AC099063.4-201ENST00000641099 1602 ntBASIC14.12□□□□□ -0.15
SKP1P63208 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.12□□□□□ -0.15
SKP1P63208 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SKP1P63208 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 AL035414.1-201ENST00000451327 857 ntBASIC14.12□□□□□ -0.15
SKP1P63208 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.12□□□□□ -0.15
SKP1P63208 GCOM2-201ENST00000509133 1104 ntBASIC14.12□□□□□ -0.15
SKP1P63208 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.12□□□□□ -0.15
SKP1P63208 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.12□□□□□ -0.15
SKP1P63208 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.12□□□□□ -0.15
SKP1P63208 AC073413.1-201ENST00000603927 732 ntBASIC14.12□□□□□ -0.15
SKP1P63208 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 AL008721.1-201ENST00000609964 604 ntBASIC14.12□□□□□ -0.15
SKP1P63208 BX088702.1-201ENST00000610784 235 ntBASIC14.12□□□□□ -0.15
SKP1P63208 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SKP1P63208 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.12□□□□□ -0.15
SKP1P63208 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.12□□□□□ -0.15
SKP1P63208 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
SKP1P63208 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SKP1P63208 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SKP1P63208 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SKP1P63208 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.12□□□□□ -0.15
SKP1P63208 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.12□□□□□ -0.15
SKP1P63208 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SKP1P63208 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.12□□□□□ -0.15
SKP1P63208 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.12□□□□□ -0.15
SKP1P63208 MRPL37P1-201ENST00000592451 1337 ntBASIC14.12□□□□□ -0.15
SKP1P63208 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SKP1P63208 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SKP1P63208 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SKP1P63208 LINC00528-201ENST00000600723 2160 ntBASIC14.12□□□□□ -0.15
SKP1P63208 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SKP1P63208 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.12□□□□□ -0.15
SKP1P63208 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 DMBT1P1-203ENST00000636837 4628 ntBASIC14.11□□□□□ -0.15
SKP1P63208 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SKP1P63208 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
SKP1P63208 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SKP1P63208 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 AL136172.1-201ENST00000598590 1394 ntBASIC14.11□□□□□ -0.15
SKP1P63208 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.11□□□□□ -0.15
SKP1P63208 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.11□□□□□ -0.15
SKP1P63208 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.11□□□□□ -0.15
SKP1P63208 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SKP1P63208 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms