Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.56□□□□□ -0.24
CXCR4P61073 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.56□□□□□ -0.24
CXCR4P61073 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 CES1P1-201ENST00000421606 1704 ntBASIC13.56□□□□□ -0.24
CXCR4P61073 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CXCR4P61073 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.56□□□□□ -0.24
CXCR4P61073 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCR4P61073 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCR4P61073 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CXCR4P61073 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CXCR4P61073 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCR4P61073 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CXCR4P61073 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCR4P61073 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.56□□□□□ -0.24
CXCR4P61073 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.56□□□□□ -0.24
CXCR4P61073 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.56□□□□□ -0.24
CXCR4P61073 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.56□□□□□ -0.24
CXCR4P61073 MIR3687-2-201ENST00000577708 61 ntBASIC13.56□□□□□ -0.24
CXCR4P61073 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCR4P61073 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CXCR4P61073 AC000095.1-201ENST00000603208 874 ntBASIC13.56□□□□□ -0.24
CXCR4P61073 MIR3687-1-201ENST00000614492 61 ntBASIC13.56□□□□□ -0.24
CXCR4P61073 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.56□□□□□ -0.24
CXCR4P61073 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CXCR4P61073 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCR4P61073 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.56□□□□□ -0.24
CXCR4P61073 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CXCR4P61073 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CXCR4P61073 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCR4P61073 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCR4P61073 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CXCR4P61073 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.56□□□□□ -0.24
CXCR4P61073 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.56□□□□□ -0.24
CXCR4P61073 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CXCR4P61073 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCR4P61073 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 KRT8P14-201ENST00000414254 1442 ntBASIC13.56□□□□□ -0.24
CXCR4P61073 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
CXCR4P61073 HSPA8P5-201ENST00000456928 2069 ntBASIC13.55□□□□□ -0.24
CXCR4P61073 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 AGAP10P-201ENST00000454844 2418 ntBASIC13.55□□□□□ -0.24
CXCR4P61073 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CXCR4P61073 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.55□□□□□ -0.24
CXCR4P61073 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CXCR4P61073 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.55□□□□□ -0.24
CXCR4P61073 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.55□□□□□ -0.24
CXCR4P61073 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CXCR4P61073 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CXCR4P61073 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CXCR4P61073 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CXCR4P61073 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CXCR4P61073 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CXCR4P61073 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 NCLP1-201ENST00000445357 1963 ntBASIC13.55□□□□□ -0.24
CXCR4P61073 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.55□□□□□ -0.24
CXCR4P61073 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.55□□□□□ -0.24
CXCR4P61073 HLA-K-203ENST00000430151 1046 ntBASIC13.55□□□□□ -0.24
CXCR4P61073 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.55□□□□□ -0.24
CXCR4P61073 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.55□□□□□ -0.24
CXCR4P61073 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.55□□□□□ -0.24
CXCR4P61073 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.55□□□□□ -0.24
CXCR4P61073 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms