Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.2□□□□□ -0.3
LHX2P50458 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LHX2P50458 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
LHX2P50458 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.2□□□□□ -0.3
LHX2P50458 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.2□□□□□ -0.3
LHX2P50458 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LHX2P50458 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.19□□□□□ -0.3
LHX2P50458 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LHX2P50458 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 AC006504.5-208ENST00000588784 2401 ntBASIC13.19□□□□□ -0.3
LHX2P50458 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.19□□□□□ -0.3
LHX2P50458 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.19□□□□□ -0.3
LHX2P50458 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LHX2P50458 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LHX2P50458 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LHX2P50458 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.19□□□□□ -0.3
LHX2P50458 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.19□□□□□ -0.3
LHX2P50458 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.19□□□□□ -0.3
LHX2P50458 MARK2P5-201ENST00000507649 634 ntBASIC13.19□□□□□ -0.3
LHX2P50458 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.19□□□□□ -0.3
LHX2P50458 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.19□□□□□ -0.3
LHX2P50458 SCARNA21-201ENST00000517026 139 ntBASIC13.19□□□□□ -0.3
LHX2P50458 AC022217.1-201ENST00000521069 738 ntBASIC13.19□□□□□ -0.3
LHX2P50458 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.19□□□□□ -0.3
LHX2P50458 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.19□□□□□ -0.3
LHX2P50458 ACTG1P17-201ENST00000558391 1119 ntBASIC13.19□□□□□ -0.3
LHX2P50458 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.19□□□□□ -0.3
LHX2P50458 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.19□□□□□ -0.3
LHX2P50458 SNORD3B-2-202ENST00000571722 791 ntBASIC13.19□□□□□ -0.3
LHX2P50458 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.19□□□□□ -0.3
LHX2P50458 AL645939.5-201ENST00000606834 243 ntBASIC13.19□□□□□ -0.3
LHX2P50458 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 AC015688.4-201ENST00000580780 1647 ntBASIC13.19□□□□□ -0.3
LHX2P50458 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
LHX2P50458 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.19□□□□□ -0.3
LHX2P50458 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.19□□□□□ -0.3
LHX2P50458 KHSRPP1-201ENST00000427983 1768 ntBASIC13.19□□□□□ -0.3
LHX2P50458 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LHX2P50458 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LHX2P50458 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.19□□□□□ -0.3
LHX2P50458 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LHX2P50458 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
LHX2P50458 FAM90A7P-201ENST00000382628 1395 ntBASIC13.19□□□□□ -0.3
LHX2P50458 FAM90A23P-201ENST00000400136 1395 ntBASIC13.19□□□□□ -0.3
LHX2P50458 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LHX2P50458 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LHX2P50458 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 MTHFR-210ENST00000641407 2387 ntBASIC13.18□□□□□ -0.3
LHX2P50458 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 TMBIM7P-202ENST00000641474 1516 ntBASIC13.18□□□□□ -0.3
LHX2P50458 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LHX2P50458 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.18□□□□□ -0.3
LHX2P50458 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.18□□□□□ -0.3
LHX2P50458 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 AL354702.1-201ENST00000442006 1960 ntBASIC13.18□□□□□ -0.3
LHX2P50458 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LHX2P50458 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.18□□□□□ -0.3
LHX2P50458 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LHX2P50458 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LHX2P50458 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.18□□□□□ -0.3
LHX2P50458 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.18□□□□□ -0.3
LHX2P50458 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms