Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.12□□□□□ -0.31
CX3CR1P49238 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.12□□□□□ -0.31
CX3CR1P49238 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CX3CR1P49238 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CX3CR1P49238 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CX3CR1P49238 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CX3CR1P49238 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CX3CR1P49238 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CX3CR1P49238 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CX3CR1P49238 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CX3CR1P49238 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CX3CR1P49238 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CX3CR1P49238 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CX3CR1P49238 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.11□□□□□ -0.31
CX3CR1P49238 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.11□□□□□ -0.31
CX3CR1P49238 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.11□□□□□ -0.31
CX3CR1P49238 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.11□□□□□ -0.31
CX3CR1P49238 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.11□□□□□ -0.31
CX3CR1P49238 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CX3CR1P49238 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.11□□□□□ -0.31
CX3CR1P49238 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
CX3CR1P49238 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
CX3CR1P49238 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CX3CR1P49238 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CX3CR1P49238 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.11□□□□□ -0.31
CX3CR1P49238 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.11□□□□□ -0.31
CX3CR1P49238 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.11□□□□□ -0.31
CX3CR1P49238 GIMAP3P-201ENST00000495150 836 ntBASIC13.11□□□□□ -0.31
CX3CR1P49238 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.11□□□□□ -0.31
CX3CR1P49238 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CX3CR1P49238 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.11□□□□□ -0.31
CX3CR1P49238 AP005019.2-201ENST00000615104 511 ntBASIC13.11□□□□□ -0.31
CX3CR1P49238 AC005252.2-201ENST00000624630 1141 ntBASIC13.11□□□□□ -0.31
CX3CR1P49238 AL603764.1-201ENST00000636452 321 ntBASIC13.11□□□□□ -0.31
CX3CR1P49238 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.11□□□□□ -0.31
CX3CR1P49238 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
CX3CR1P49238 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.11□□□□□ -0.31
CX3CR1P49238 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CX3CR1P49238 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.11□□□□□ -0.31
CX3CR1P49238 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.11□□□□□ -0.31
CX3CR1P49238 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.11□□□□□ -0.31
CX3CR1P49238 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.11□□□□□ -0.31
CX3CR1P49238 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.11□□□□□ -0.31
CX3CR1P49238 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CX3CR1P49238 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.11□□□□□ -0.31
CX3CR1P49238 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CX3CR1P49238 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.1□□□□□ -0.31
CX3CR1P49238 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.1□□□□□ -0.31
CX3CR1P49238 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CX3CR1P49238 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.1□□□□□ -0.31
CX3CR1P49238 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CX3CR1P49238 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.1□□□□□ -0.31
CX3CR1P49238 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.1□□□□□ -0.31
CX3CR1P49238 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CX3CR1P49238 EIF3FP3-201ENST00000434851 1086 ntBASIC13.1□□□□□ -0.31
CX3CR1P49238 FAM207CP-201ENST00000443486 507 ntBASIC13.1□□□□□ -0.31
CX3CR1P49238 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CX3CR1P49238 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.1□□□□□ -0.31
CX3CR1P49238 KRT18P25-201ENST00000508931 1278 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms