Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 AC092933.1-201ENST00000393644 945 ntBASIC13.26□□□□□ -0.29
CSNK1A1P48729 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 POM121L8P-201ENST00000417732 1281 ntBASIC13.26□□□□□ -0.29
CSNK1A1P48729 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 POM121L9P-203ENST00000441984 1285 ntBASIC13.26□□□□□ -0.29
CSNK1A1P48729 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 MESTP3-201ENST00000503460 968 ntBASIC13.26□□□□□ -0.29
CSNK1A1P48729 FTLP10-202ENST00000505798 471 ntBASIC13.26□□□□□ -0.29
CSNK1A1P48729 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 GNRHR2-203ENST00000581100 1187 ntBASIC13.26□□□□□ -0.29
CSNK1A1P48729 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 AC138466.3-201ENST00000619983 221 ntBASIC13.26□□□□□ -0.29
CSNK1A1P48729 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 AC132938.4-201ENST00000623835 848 ntBASIC13.26□□□□□ -0.29
CSNK1A1P48729 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 AL136172.1-201ENST00000598590 1394 ntBASIC13.25□□□□□ -0.29
CSNK1A1P48729 AL138725.1-201ENST00000407347 1314 ntBASIC13.25□□□□□ -0.29
CSNK1A1P48729 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 AC016694.1-201ENST00000434179 700 ntBASIC13.25□□□□□ -0.29
CSNK1A1P48729 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 ECM1P1-201ENST00000604092 1279 ntBASIC13.25□□□□□ -0.29
CSNK1A1P48729 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.25□□□□□ -0.29
CSNK1A1P48729 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1A1P48729 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CSNK1A1P48729 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CSNK1A1P48729 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1A1P48729 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms