Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.7■□□□□ 0.1
BRCC3P46736 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BRCC3P46736 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.7■□□□□ 0.1
BRCC3P46736 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.7■□□□□ 0.1
BRCC3P46736 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
BRCC3P46736 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.7■□□□□ 0.1
BRCC3P46736 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
BRCC3P46736 AC078875.1-201ENST00000431907 724 ntBASIC15.7■□□□□ 0.1
BRCC3P46736 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.7■□□□□ 0.1
BRCC3P46736 AL596276.2-201ENST00000447525 331 ntBASIC15.7■□□□□ 0.1
BRCC3P46736 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.7■□□□□ 0.1
BRCC3P46736 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 RN7SL769P-201ENST00000469386 295 ntBASIC15.7■□□□□ 0.1
BRCC3P46736 AL161670.2-201ENST00000557650 1227 ntBASIC15.7■□□□□ 0.1
BRCC3P46736 AC079328.1-201ENST00000560358 952 ntBASIC15.7■□□□□ 0.1
BRCC3P46736 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.7■□□□□ 0.1
BRCC3P46736 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.7■□□□□ 0.1
BRCC3P46736 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.7■□□□□ 0.1
BRCC3P46736 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.7■□□□□ 0.1
BRCC3P46736 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
BRCC3P46736 KRT8P28-201ENST00000433288 1390 ntBASIC15.7■□□□□ 0.1
BRCC3P46736 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
BRCC3P46736 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
BRCC3P46736 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BRCC3P46736 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.7■□□□□ 0.1
BRCC3P46736 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.7■□□□□ 0.1
BRCC3P46736 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
BRCC3P46736 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCC3P46736 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.7■□□□□ 0.1
BRCC3P46736 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
BRCC3P46736 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.69■□□□□ 0.1
BRCC3P46736 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
BRCC3P46736 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
BRCC3P46736 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 AC091046.1-201ENST00000331871 207 ntBASIC15.69■□□□□ 0.1
BRCC3P46736 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.69■□□□□ 0.1
BRCC3P46736 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.69■□□□□ 0.1
BRCC3P46736 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.69■□□□□ 0.1
BRCC3P46736 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.69■□□□□ 0.1
BRCC3P46736 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.69■□□□□ 0.1
BRCC3P46736 AC103988.2-201ENST00000561804 725 ntBASIC15.69■□□□□ 0.1
BRCC3P46736 AC016629.1-201ENST00000596579 586 ntBASIC15.69■□□□□ 0.1
BRCC3P46736 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.69■□□□□ 0.1
BRCC3P46736 AC015967.2-201ENST00000624092 234 ntBASIC15.69■□□□□ 0.1
BRCC3P46736 AC006435.4-201ENST00000625037 234 ntBASIC15.69■□□□□ 0.1
BRCC3P46736 AL356737.1-201ENST00000634391 234 ntBASIC15.69■□□□□ 0.1
BRCC3P46736 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
BRCC3P46736 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.69■□□□□ 0.1
BRCC3P46736 NAP1L6-202ENST00000641404 1222 ntBASIC15.69■□□□□ 0.1
BRCC3P46736 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.69■□□□□ 0.1
BRCC3P46736 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.69■□□□□ 0.1
BRCC3P46736 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.69■□□□□ 0.1
BRCC3P46736 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.69■□□□□ 0.1
BRCC3P46736 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.69■□□□□ 0.1
BRCC3P46736 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
BRCC3P46736 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 TSPY26P-202ENST00000565928 3884 ntBASIC15.69■□□□□ 0.1
BRCC3P46736 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms