Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM23P36406 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRIM23P36406 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
TRIM23P36406 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM23P36406 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
TRIM23P36406 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM23P36406 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRIM23P36406 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM23P36406 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM23P36406 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRIM23P36406 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRIM23P36406 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM23P36406 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
TRIM23P36406 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM23P36406 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM23P36406 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM23P36406 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM23P36406 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM23P36406 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM23P36406 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRIM23P36406 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM23P36406 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM23P36406 AC005077.2-201ENST00000449786 690 ntBASIC14.56□□□□□ -0.08
TRIM23P36406 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM23P36406 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.56□□□□□ -0.08
TRIM23P36406 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM23P36406 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM23P36406 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.56□□□□□ -0.08
TRIM23P36406 ACTG1P17-201ENST00000558391 1119 ntBASIC14.56□□□□□ -0.08
TRIM23P36406 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM23P36406 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.56□□□□□ -0.08
TRIM23P36406 AL132994.2-201ENST00000603120 687 ntBASIC14.56□□□□□ -0.08
TRIM23P36406 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.56□□□□□ -0.08
TRIM23P36406 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
TRIM23P36406 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRIM23P36406 FAM90A7P-201ENST00000382628 1395 ntBASIC14.56□□□□□ -0.08
TRIM23P36406 FAM90A23P-201ENST00000400136 1395 ntBASIC14.56□□□□□ -0.08
TRIM23P36406 MBLAC2-202ENST00000514906 1936 ntBASIC14.56□□□□□ -0.08
TRIM23P36406 AC018529.2-202ENST00000611482 3087 ntBASIC14.56□□□□□ -0.08
TRIM23P36406 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
TRIM23P36406 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRIM23P36406 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRIM23P36406 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
TRIM23P36406 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM23P36406 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM23P36406 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRIM23P36406 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRIM23P36406 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM23P36406 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
TRIM23P36406 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM23P36406 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM23P36406 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.55□□□□□ -0.08
TRIM23P36406 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM23P36406 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRIM23P36406 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM23P36406 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM23P36406 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms