Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA13P31271 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA13P31271 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA13P31271 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXA13P31271 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HOXA13P31271 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXA13P31271 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HOXA13P31271 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HOXA13P31271 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
HOXA13P31271 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA13P31271 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXA13P31271 TUBBP5-203ENST00000508529 1334 ntBASIC16.82■□□□□ 0.28
HOXA13P31271 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
HOXA13P31271 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA13P31271 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXA13P31271 AL035414.1-201ENST00000451327 857 ntBASIC16.82■□□□□ 0.28
HOXA13P31271 HLA-J-204ENST00000495278 958 ntBASIC16.82■□□□□ 0.28
HOXA13P31271 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXA13P31271 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.82■□□□□ 0.28
HOXA13P31271 SNORD3B-2-202ENST00000571722 791 ntBASIC16.82■□□□□ 0.28
HOXA13P31271 AC009884.2-201ENST00000603110 324 ntBASIC16.82■□□□□ 0.28
HOXA13P31271 AC026740.1-201ENST00000607068 791 ntBASIC16.82■□□□□ 0.28
HOXA13P31271 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA13P31271 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA13P31271 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA13P31271 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
HOXA13P31271 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HOXA13P31271 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXA13P31271 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
HOXA13P31271 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HOXA13P31271 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXA13P31271 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HOXA13P31271 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 AL590440.2-201ENST00000641973 1595 ntBASIC16.81■□□□□ 0.28
HOXA13P31271 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 TMBIM7P-202ENST00000641474 1516 ntBASIC16.81■□□□□ 0.28
HOXA13P31271 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXA13P31271 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
HOXA13P31271 FAM90A7P-201ENST00000382628 1395 ntBASIC16.81■□□□□ 0.28
HOXA13P31271 FAM90A23P-201ENST00000400136 1395 ntBASIC16.81■□□□□ 0.28
HOXA13P31271 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXA13P31271 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HOXA13P31271 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HOXA13P31271 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
HOXA13P31271 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HOXA13P31271 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXA13P31271 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.81■□□□□ 0.28
HOXA13P31271 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXA13P31271 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.81■□□□□ 0.28
HOXA13P31271 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXA13P31271 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HOXA13P31271 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXA13P31271 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.81■□□□□ 0.28
HOXA13P31271 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.81■□□□□ 0.28
HOXA13P31271 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
HOXA13P31271 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.81■□□□□ 0.28
HOXA13P31271 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXA13P31271 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXA13P31271 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HOXA13P31271 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXA13P31271 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
HOXA13P31271 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
HOXA13P31271 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXA13P31271 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA13P31271 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXA13P31271 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXA13P31271 AC139712.1-201ENST00000378256 1875 ntBASIC16.8■□□□□ 0.28
HOXA13P31271 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HOXA13P31271 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms