Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC005077.2-201ENST00000449786 690 ntBASIC12.78□□□□□ -0.36
CD40P25942 AC104073.2-201ENST00000453737 312 ntBASIC12.78□□□□□ -0.36
CD40P25942 HIST2H2BC-201ENST00000498492 580 ntBASIC12.78□□□□□ -0.36
CD40P25942 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.78□□□□□ -0.36
CD40P25942 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.78□□□□□ -0.36
CD40P25942 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.78□□□□□ -0.36
CD40P25942 ACTG1P17-201ENST00000558391 1119 ntBASIC12.78□□□□□ -0.36
CD40P25942 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.78□□□□□ -0.36
CD40P25942 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.78□□□□□ -0.36
CD40P25942 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.78□□□□□ -0.36
CD40P25942 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.78□□□□□ -0.36
CD40P25942 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CD40P25942 AC009884.2-201ENST00000603110 324 ntBASIC12.78□□□□□ -0.36
CD40P25942 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.78□□□□□ -0.36
CD40P25942 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CD40P25942 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CD40P25942 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CD40P25942 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.78□□□□□ -0.36
CD40P25942 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CD40P25942 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CD40P25942 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD40P25942 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.78□□□□□ -0.36
CD40P25942 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CD40P25942 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD40P25942 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.77□□□□□ -0.36
CD40P25942 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD40P25942 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD40P25942 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD40P25942 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD40P25942 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD40P25942 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.77□□□□□ -0.36
CD40P25942 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CD40P25942 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CD40P25942 AC092135.3-201ENST00000624151 1846 ntBASIC12.77□□□□□ -0.37
CD40P25942 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
CD40P25942 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CD40P25942 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CD40P25942 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD40P25942 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CD40P25942 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.77□□□□□ -0.37
CD40P25942 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CD40P25942 AL008707.1-201ENST00000422498 534 ntBASIC12.77□□□□□ -0.37
CD40P25942 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.77□□□□□ -0.37
CD40P25942 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.77□□□□□ -0.37
CD40P25942 RPL18P13-201ENST00000478088 569 ntBASIC12.77□□□□□ -0.37
CD40P25942 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.77□□□□□ -0.37
CD40P25942 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.77□□□□□ -0.37
CD40P25942 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
CD40P25942 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.77□□□□□ -0.37
CD40P25942 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.77□□□□□ -0.37
CD40P25942 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.77□□□□□ -0.37
CD40P25942 MIR6720-201ENST00000611664 98 ntBASIC12.77□□□□□ -0.37
CD40P25942 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
CD40P25942 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.77□□□□□ -0.37
CD40P25942 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.77□□□□□ -0.37
CD40P25942 AC068587.8-201ENST00000641239 219 ntBASIC12.77□□□□□ -0.37
CD40P25942 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD40P25942 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD40P25942 AL008718.2-201ENST00000609206 1313 ntBASIC12.77□□□□□ -0.37
CD40P25942 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD40P25942 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CD40P25942 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.77□□□□□ -0.37
CD40P25942 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD40P25942 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD40P25942 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.77□□□□□ -0.37
CD40P25942 AC013726.1-201ENST00000563747 2285 ntBASIC12.77□□□□□ -0.37
CD40P25942 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD40P25942 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.77□□□□□ -0.37
CD40P25942 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CD40P25942 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CD40P25942 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CD40P25942 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CD40P25942 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.76□□□□□ -0.37
CD40P25942 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.76□□□□□ -0.37
CD40P25942 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
CD40P25942 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.76□□□□□ -0.37
CD40P25942 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.76□□□□□ -0.37
CD40P25942 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CD40P25942 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
CD40P25942 LINC00528-201ENST00000600723 2160 ntBASIC12.76□□□□□ -0.37
CD40P25942 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CD40P25942 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CD40P25942 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms