Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
MMP11P24347 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
MMP11P24347 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.12□□□□□ -0.15
MMP11P24347 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.12□□□□□ -0.15
MMP11P24347 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 MESTP3-201ENST00000503460 968 ntBASIC14.12□□□□□ -0.15
MMP11P24347 AL391280.1-201ENST00000506969 1062 ntBASIC14.12□□□□□ -0.15
MMP11P24347 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.12□□□□□ -0.15
MMP11P24347 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.12□□□□□ -0.15
MMP11P24347 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.12□□□□□ -0.15
MMP11P24347 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.12□□□□□ -0.15
MMP11P24347 AC106820.3-201ENST00000561653 397 ntBASIC14.12□□□□□ -0.15
MMP11P24347 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.12□□□□□ -0.15
MMP11P24347 AC073413.1-201ENST00000603927 732 ntBASIC14.12□□□□□ -0.15
MMP11P24347 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.12□□□□□ -0.15
MMP11P24347 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.12□□□□□ -0.15
MMP11P24347 AL157414.3-201ENST00000624276 1954 ntBASIC14.12□□□□□ -0.15
MMP11P24347 AC117489.1-201ENST00000625169 3217 ntBASIC14.12□□□□□ -0.15
MMP11P24347 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
MMP11P24347 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 CLUHP2-201ENST00000426660 1303 ntBASIC14.12□□□□□ -0.15
MMP11P24347 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.12□□□□□ -0.15
MMP11P24347 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.12□□□□□ -0.15
MMP11P24347 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MMP11P24347 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 REXO1L4P-201ENST00000605109 1937 ntBASIC14.11□□□□□ -0.15
MMP11P24347 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.11□□□□□ -0.15
MMP11P24347 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.11□□□□□ -0.15
MMP11P24347 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
MMP11P24347 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MMP11P24347 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.11□□□□□ -0.15
MMP11P24347 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
MMP11P24347 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MMP11P24347 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.11□□□□□ -0.15
MMP11P24347 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
MMP11P24347 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.11□□□□□ -0.15
MMP11P24347 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.11□□□□□ -0.15
MMP11P24347 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.11□□□□□ -0.15
MMP11P24347 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MMP11P24347 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.11□□□□□ -0.15
MMP11P24347 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.11□□□□□ -0.15
MMP11P24347 HSPB1P2-201ENST00000448722 546 ntBASIC14.11□□□□□ -0.15
MMP11P24347 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.11□□□□□ -0.15
MMP11P24347 AC004898.1-201ENST00000451057 766 ntBASIC14.11□□□□□ -0.15
MMP11P24347 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.11□□□□□ -0.15
MMP11P24347 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.11□□□□□ -0.15
MMP11P24347 AC018529.2-202ENST00000611482 3087 ntBASIC14.11□□□□□ -0.15
MMP11P24347 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.11□□□□□ -0.15
MMP11P24347 AL096828.3-201ENST00000615354 462 ntBASIC14.11□□□□□ -0.15
MMP11P24347 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.11□□□□□ -0.15
MMP11P24347 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MMP11P24347 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.11□□□□□ -0.15
MMP11P24347 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
MMP11P24347 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
MMP11P24347 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.11□□□□□ -0.15
MMP11P24347 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP11P24347 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.1□□□□□ -0.15
MMP11P24347 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP11P24347 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms