Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
ATF1P18846 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.09□□□□□ -0.31
ATF1P18846 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.09□□□□□ -0.31
ATF1P18846 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.09□□□□□ -0.31
ATF1P18846 TSSK5P-201ENST00000423978 907 ntBASIC13.09□□□□□ -0.31
ATF1P18846 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.09□□□□□ -0.31
ATF1P18846 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.09□□□□□ -0.31
ATF1P18846 AC009477.1-201ENST00000452936 217 ntBASIC13.09□□□□□ -0.31
ATF1P18846 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.09□□□□□ -0.31
ATF1P18846 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ATF1P18846 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.09□□□□□ -0.31
ATF1P18846 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.09□□□□□ -0.31
ATF1P18846 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.09□□□□□ -0.31
ATF1P18846 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.09□□□□□ -0.31
ATF1P18846 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ATF1P18846 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ATF1P18846 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ATF1P18846 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ATF1P18846 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.09□□□□□ -0.31
ATF1P18846 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.09□□□□□ -0.31
ATF1P18846 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ATF1P18846 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
ATF1P18846 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
ATF1P18846 TCAM1P-207ENST00000485295 1537 ntBASIC13.08□□□□□ -0.31
ATF1P18846 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
ATF1P18846 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ATF1P18846 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
ATF1P18846 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
ATF1P18846 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 FAM90A12P-201ENST00000519497 2375 ntBASIC13.08□□□□□ -0.32
ATF1P18846 FAM90A24P-201ENST00000520792 2369 ntBASIC13.08□□□□□ -0.32
ATF1P18846 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.08□□□□□ -0.32
ATF1P18846 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.08□□□□□ -0.32
ATF1P18846 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ATF1P18846 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.08□□□□□ -0.32
ATF1P18846 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.08□□□□□ -0.32
ATF1P18846 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ATF1P18846 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.08□□□□□ -0.32
ATF1P18846 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 AC009407.1-201ENST00000568958 598 ntBASIC13.08□□□□□ -0.32
ATF1P18846 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.08□□□□□ -0.32
ATF1P18846 AL391069.4-201ENST00000609583 481 ntBASIC13.08□□□□□ -0.32
ATF1P18846 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.32
ATF1P18846 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ATF1P18846 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.08□□□□□ -0.32
ATF1P18846 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 CLK3P2-201ENST00000427566 1453 ntBASIC13.08□□□□□ -0.32
ATF1P18846 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.08□□□□□ -0.32
ATF1P18846 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.08□□□□□ -0.32
ATF1P18846 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.08□□□□□ -0.32
ATF1P18846 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATF1P18846 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
ATF1P18846 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
ATF1P18846 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ATF1P18846 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ATF1P18846 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ATF1P18846 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ATF1P18846 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms