Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC172P0C7W6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 AL354702.1-201ENST00000442006 1960 ntBASIC16.15■□□□□ 0.18
CCDC172P0C7W6 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 TLE1P1-201ENST00000422965 589 ntBASIC16.15■□□□□ 0.18
CCDC172P0C7W6 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 ENPP7P5-201ENST00000541031 1031 ntBASIC16.15■□□□□ 0.18
CCDC172P0C7W6 AC092552.1-201ENST00000547243 906 ntBASIC16.15■□□□□ 0.18
CCDC172P0C7W6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 SPDYE22P-201ENST00000582158 798 ntBASIC16.15■□□□□ 0.18
CCDC172P0C7W6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 AC133539.2-201ENST00000604757 467 ntBASIC16.15■□□□□ 0.18
CCDC172P0C7W6 AP005019.2-201ENST00000615104 511 ntBASIC16.15■□□□□ 0.18
CCDC172P0C7W6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC172P0C7W6 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
CCDC172P0C7W6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC172P0C7W6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC172P0C7W6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.14■□□□□ 0.18
CCDC172P0C7W6 LRRC59-203ENST00000576448 1531 ntBASIC16.14■□□□□ 0.18
CCDC172P0C7W6 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 GALC-206ENST00000544807 2528 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC172P0C7W6 AC124283.3-201ENST00000570869 594 ntBASIC16.14■□□□□ 0.17
CCDC172P0C7W6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms