Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MIR940-201ENST00000401276 94 ntBASIC16.72■□□□□ 0.27
TPM3P06753 AL080243.2-201ENST00000418783 582 ntBASIC16.72■□□□□ 0.27
TPM3P06753 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.72■□□□□ 0.27
TPM3P06753 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.72■□□□□ 0.27
TPM3P06753 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.72■□□□□ 0.27
TPM3P06753 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
TPM3P06753 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC16.72■□□□□ 0.27
TPM3P06753 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TPM3P06753 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TPM3P06753 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC16.71■□□□□ 0.27
TPM3P06753 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC16.71■□□□□ 0.27
TPM3P06753 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TPM3P06753 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.71■□□□□ 0.27
TPM3P06753 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC16.71■□□□□ 0.27
TPM3P06753 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.71■□□□□ 0.27
TPM3P06753 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.71■□□□□ 0.27
TPM3P06753 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.71■□□□□ 0.27
TPM3P06753 ALG1L5P-201ENST00000482043 771 ntBASIC16.71■□□□□ 0.27
TPM3P06753 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.71■□□□□ 0.27
TPM3P06753 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.71■□□□□ 0.27
TPM3P06753 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.71■□□□□ 0.27
TPM3P06753 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.71■□□□□ 0.27
TPM3P06753 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.71■□□□□ 0.27
TPM3P06753 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.71■□□□□ 0.27
TPM3P06753 MIR4453-201ENST00000584019 89 ntBASIC16.71■□□□□ 0.27
TPM3P06753 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.71■□□□□ 0.27
TPM3P06753 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.71■□□□□ 0.27
TPM3P06753 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.71■□□□□ 0.27
TPM3P06753 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC16.71■□□□□ 0.27
TPM3P06753 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.71■□□□□ 0.27
TPM3P06753 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TPM3P06753 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TPM3P06753 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TPM3P06753 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TPM3P06753 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
TPM3P06753 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.26
TPM3P06753 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TPM3P06753 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM3P06753 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM3P06753 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM3P06753 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM3P06753 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TPM3P06753 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM3P06753 AC092053.3-201ENST00000641308 4975 ntBASIC16.7■□□□□ 0.26
TPM3P06753 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
TPM3P06753 AC068760.1-201ENST00000493579 1953 ntBASIC16.7■□□□□ 0.26
TPM3P06753 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.7■□□□□ 0.26
TPM3P06753 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.7■□□□□ 0.26
TPM3P06753 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TPM3P06753 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.7■□□□□ 0.26
TPM3P06753 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.7■□□□□ 0.26
TPM3P06753 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM3P06753 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM3P06753 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
TPM3P06753 GPS2P2-201ENST00000430745 888 ntBASIC16.7■□□□□ 0.26
TPM3P06753 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.7■□□□□ 0.26
TPM3P06753 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.7■□□□□ 0.26
TPM3P06753 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.7■□□□□ 0.26
TPM3P06753 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TPM3P06753 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.7■□□□□ 0.26
TPM3P06753 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM3P06753 AC005829.1-201ENST00000570002 483 ntBASIC16.7■□□□□ 0.26
TPM3P06753 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms